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About this site
This is not a typical blog, but rather a collection of posts forming series of notebooks. Instead of browsing in chronological order, a better way to explore this site is to start from categories or from pages.
To the extent possible under law,
Paweł Szczęsny
has waived all copyright and related or neighboring rights to
all original content on this site.
Given the blog is written from Poland, I cannot waive all copyrights anyway (it's illegal in here). So, while from legal point of view it's still CC-BY, I won't hunt anybody for lack of attribution. Treat it as it were in public domain.
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Pawel recommends
- 07/20/11 PHD comic: 'Intellectual Freedom'
- Quantification of mRNA and protein and integration with protein turnover in a bacterium
- [News & Analysis] Psychology: Searching for the Google Effect on People's Memory
- How to waste public money in one easy step…
- Epigenome-wide association studies for common human diseases
- Differential Producibility Analysis (DPA) of Transcriptomic Data with Metabolic Networks: Deconstructing the Metabolic Response of M. tuberculosis.
- Learning: Not Just the Facts, Ma'am, but the Counterfactuals as Well.
- Genome sequence and analysis of the tuber crop potato
- The neural basis of following advice.
- How stands the Tree of Life a century and a half after The Origin?
Reading list
- Structural basis for alginate secretion across the bacterial outer membrane.
- A Model of Proto-Anti-Codon RNA Enzymes Requiring L: -Amino Acid Homochirality.
- Day Old News is Fresh Enough
- Bridging the Resolution Gap in Structural Modeling of 3D Genome Organization.
- Does the potential for chaos constrain the embryonic cell-cycle oscillator?
- Sequence, structure, and network evolution of protein phosphorylation.
- A Polycomb-based switch underlying quantitative epigenetic memory
- Microbial Virulence as an Emergent Property: Consequences and Opportunities
- How accurate is the new Ion Torrent genome, really?
- The future of model organisms in human disease research.
Posts Tagged ‘data mining’
A short note on data dynamics
4, Dec 2010I’ve just checked that at least 400 proteins in Uniprot had their sequence updated since beginning of this year. It could be more, but I work on a subset of human proteins that consists of ca. 1500 proteins, so probably I see only portion of changes. So, instead of wrapping up the paper, I’m redoing analysis [...]
- In: Bioinformatics
- Tags: data dynamics, data mining, data stability
Available and relevant
23, Jan 2010Great question is asked on EPT blog: What would be the consequence of just a single butterfly wing-flap in, say, Sweden on some new medical development in Peru? For researchers to be able to use a new development from the opposite side of the world, such development simply has to be be available. Without OA, [...]
Patent data available. So what?
31, Dec 2009From O’Reilly Radar post entitled: Unlikely Group Working Happily Together To Solve Patent Problem: In September, the Patent Office announced a rather strange “Request for Information” (RFI). Under this proposed scheme, the Patent Office would receive a substantial (upwards of $10 million!) donation of equipment from a vendor. In return, the vendor would get to [...]